aligner< T > Class Template Reference

#include <aligner.h>

Inheritance diagram for aligner< T >:

List of all members.

Classes
struct	alin
Public Member Functions
	aligner (const std::wstring &fname, int const _debug=0)
	~aligner ()
alin *	align (const std::wstring &wa, const std::wstring &wb, const int mode=SEMILOCAL)
Private Attributes
phd< T > *	sc
T	score
int	debug

template<typename T = int>
class aligner< T >

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Constructor & Destructor Documentation

template<typename T = int>

aligner< T >::aligner	(	const std::wstring &	fname,
		int const	_debug = 0
	)		[inline]

template<typename T = int>

aligner< T >::~aligner

(

)

[inline]

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Member Function Documentation

template<typename T = int>

alin* aligner< T >::align	(	const std::wstring &	wa,
		const std::wstring &	wb,
		const int	mode = SEMILOCAL
	)		[inline]

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Member Data Documentation

template<typename T = int>

int aligner< T >::debug [private]

Referenced by aligner< int >::aligner().

template<typename T = int>

phd<T>* aligner< T >::sc [private]

Referenced by aligner< int >::align(), aligner< int >::aligner(), and aligner< int >::~aligner().

template<typename T = int>

T aligner< T >::score [private]

Referenced by aligner< int >::align().

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The documentation for this class was generated from the following file:

• aligner.h